Then install biocondupackagesright now, the easiest way to install bioconductor packages is using the bioclite. r installation script. Here's how to use it:
In an R command window, type the following:
Xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Source (">
Download the package and run the following command:
> R cmd install-l the directory you want to install *. GZ (your package)
My method is:
Download the package to your local device
> Install. Packages ("package_path", repos = NULL)
Commands:
Install install add-on packages
Please use 'r cmd command -- help' to obtain further information about
The usage of 'command '.
We recommend that you use this method.
Source ("http://www.bioconductor.org/biocLite.R ")
Bioclite (C ("pkg1", "pkg2 "))
# Where "pkg1" and "pkg2" are the names of the packages you wowould like to install.
Because the r package involves the R version and the version of the dependency package that has been installed, it is hard
When the package is down, it may not match at all. The bioclite script can automatically process these operations to ensure that the installed package is available.
R CMD is a cool command. But Linux is prone to common faults and complicated dependencies.
Bioclite is very similar to Yum in fc6 Linux. As long as the network is good, such installation is undoubtedly manual.
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