Viewing the frequency and number of SNPs in different regions, countries, and continents using the thousand Human Genome database

Source: Internet
Author: User

First, access to the Thousand Human Genome Database website: https://www.ncbi.nlm.nih.gov/variation/tools/1000genomes/

As shown in the Database box, enter the SNP that we are interested in, such as rs608139

The following interface appears after the search, and the yellow area is the SNP that we are interested in, and the red box is the frequency and number of different countries and regions that correspond to the SNP.

The Millennium Genome database includes countries and regions as shown in the table below.

Countries

Continent

Population (ABB)

China, Beijing

Asian

Chb

Japan, Tokyo

Asian

MP3

China, south

Asian

CHS

Viet Nam

Asian

KHV

Indian Telugu Man from the UK

Asian

Itu

Bangladesh

Asian

BEB

Dai, Xishuangbanna, China

Asian

CDX

Sri Lankan Tamils from the UK

Asian

STU

Gujarat Indians, from Houston, Texas

Asian

GIH

Pakistan

Asian

PJL

Peru

South America

PEL

Finland

Europe

FIN

American Los Angeles, Mexican ancestor.

North America

MXL

Utah State (CEPH), from the northern and western European descent

North America (Europe ancestry)

CEU

Tuscany

Europe

Ss.

Britons from England and Scotland.

Europe

GBR

Colombian people from Medellin, Colombia

South America

Clm

Iberians in Spain.

Europe

Ibs

Puerto Rico

North America

Pur

Americans of African descent

North America (African Ancestry)

ASW

African Caribbean

America

ACB

Gambian

Africa

GWD

Essang people, Nigeria

Africa

ESN

Kenya

Africa

LWK

In Sierra Leone (Africa) Manders

Africa

MSL

Yoruba, Nigeria

Africa

YRI

Viewing the frequency and number of SNPs in different regions, countries, and continents using the thousand Human Genome database

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