NAMD 2.8 release of large-scale biological molecular system simulation

NAMD 2.8 This version has been heavily enhanced.

NAMD is a parallel, object-oriented molecular dynamics program designed for high-performance large-scale biological molecular systems simulation. NAMD is a parallel molecular dynamics code for rapidly simulating macromolecular systems on parallel. NAMD uses an empirical force field, such as AMBER,CHARMM and dreiding, to compute the atomic trajectory by numerically solving the motion equation.

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AIX-POWER-LAPI (IBM Power Clusters) Aix-power-multicore (IBM Power single node) linux-x86 (32-bit INTEL/AMD with Ethernet) Linux-x86-tcp (TCP May is decoupled on gigabit) Linux-x86_64-multicore (64-bit intel/amd single node) linux-x86_64 (64-bit INTEL/AMD with Ethernet) Linux-x86_64-tcp (TCP May is decoupled on gigabit) Linux-x86_64-ibverbs (InfiniBand via OpenFabrics ofed, no MPI needed) LINUX-X86_64-IBVERBS-SMP (InfiniBand Plus shared memory, no MPI needed) Linux-x86_64-cuda (NVIDIA CUDA Acceleration) Linux-x86_64-ibverbs-cuda (NVIDIA CUDA with InfiniBand) http://www.aliyun.com/zixun/aggregation/11691. HTML ">macosx-x86" (Mac OS X for Intel processors, fails on 10.7 "Lion") macosx-x86_64 (Mac OS X for 64-bit Intel processors) MACOSX-PPC (Mac OS X for PowerPC) solaris-x86_64 Win32 (Windows XP, etc.) Win64-mpi (Windows HPC Server) Source Code