application dicom

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How do I set the window location and window width when Itk reads CT DICOM?

Tags: Io AR, use SP strong file on, CTI Keywords: DICOM Itk CT unclear window width Fragment: I recently used Itk to read DICOM. Before hearing the task, I didn't even know what Itk and DICOM are. of course, when I first heard the task, I only had the "what is this code? "" What is this code? "... After being disgusted with the progress for a few days, I

Understanding of DICOM parameter information and data reading and writing

1. Data bit storage (dcm_bitsstored), Data bit allocation (dcm_bitsallocated), data symbol type (dcm_pixelrepresentation), grayscale offset (dcm_rescaleintercept) Relationship to the data value (Dcm_pixeldata) itself:(1) dcm_bitsallocated is the number of bytes allocated for each pixel, such as a single byte is 8, two bytes is 16 ...., it is best to use the corresponding dcm_bitsallocated data type to read the DICOM data and save it to the computer me

Share some dicom data download sites

The DICOM data in the hospital is not easy to copy, so here are some medical data, but not limited to dicom data URLs for everyone to download.Stanford University Body Database (RAW data)http://graphics.stanford.edu/data/voldata/The DICOM data provided by OsiriX is mostly compressed and VTK cannot be resolved by default. Available DCMTK parsinghttp://www.osirix-v

Processing Dicom images using Matlab

Recently, when processing CT images, CT images scan the human body layer by layer, and there are many unnecessary parts in the image, such as the ribs, as a result, there are many unnecessary parts of the 3D reconstruction image. Very difficult to handle. As a result, I thought of a simple method to set unnecessary pixels to black for a dicom image. Originally intended to be implemented with VC ++ 6.0 + VTK, debugging is too troublesome, it is easy t

DICOM-RT: Various images in the field of radiotherapy

Background:The DICOM-RT Series blog focuses on the complementary criteria for radiotherapy in the DICOM3.0, namely Dicom-rt. In order to facilitate the follow-up on the dicom-rt of the relevant IoD, SOP concept of understanding, the column has recently done radiation-related knowledge points of popularization.PS: Of course, I am not a radiation professional, the

How to Use DICOM tags to determine the direction of 3D images

Http://blog.csdn.net/yonghong1/article/details/6004185 In DICOM, three tags are associated with the imaging direction. Reference Source: kitware instructions on DICOM direction Http://public.kitware.com/IGSTKWIKI/index.php/DICOM_data_orientation Including 1. Image Position (0020,0032): Specifies the x, y, and z coordinates of the upper left hand corner of the image. in other words, this tag specifies th

Python threshold segmentation for DICOM images

Python to the dicom image processing, inseparable from the Pydicom,opencv-python,matplotlib,numpy four code base, installed after the completion of the four code base,The dicom image can be read, and the image is processed, the result is explicitly processed, the following examples illustrate:ImportCv2ImportNumPyImportdicom fromMatplotlibImportPyplot as Plt#reading a single

Two free dciom Image Browsing software introductions and DICOM image examples for download

1. DICOM medical image viewer, which must be installed. : See the attachment d3explor-v2.10.9.4b on this page 2. ezdicom a foreign small software that can drag images directly: Official ezdicom : See the attachment on this page. 3. Some DCM images and hospital instances are collected from the Internet. Very cherished. Hey : DCM image instances are compressed separately. See the attachment on this page. Ezdicom.rar (260.7 K

VTK: Read DICOM, Volume Rendering

# Refer to the VTK built-in routines examples/GUI/Python/volumerenderwithboxwidget. py # From http://www.vtk.org/doc/nightly /Html // or see vtkdicomimagereader and vtkimageshi in the manual To use ftscale and other classes, modify the routine file as follows: # Conversion is required because volumemapper can accept the unsigned number unsigned short or unsigned char. Vtkimageshift is used here. Scale #! /Usr/bin/ENV Python # Demonstrate how to use the vtkboxwidget to Control Volume Rendering #

Create a DICOM dataset and keep it to the simple sample code of the file

Simple sample code for creating a DICOM dataset and keeping it to a file: Char uid [100];Dcmfileformat fileformat;Dcmdataset * dataset = fileformat. getdataset ();Dataset-> putandinsertstring (dcm_sopclassuid, uid_secondarycaptureimagestorage );Dataset-> putandinsertstring (dcm_sopinstanceuid, dcmgenerateuniqueidentifier (UID, site_instance_uid_root ));Dataset-> putandinsertstring (dcm_patientname, "doe ^ John ");......Dataset-> putandinsertuint8arra

Applying fo-dicom in the AspNet WebApi throws an exception: No codec registered for Tranfer syntax:

Background:in making a dicom Web Service, where Wado-rs needs to parse Transfersyntax, then it uses the Dicomfile.changetransfersyntax method in fo-dicom. code similar to:var df = dicomfile.open (SamplesDir + @ "\user submitted\overlays.dcm");df = df. Changetransfersyntax (dicomtransfersyntax.jpeg2000lossless);Problem:The above code is working properly in the console (EXE) and throws an exception in the WEB

Introduction to DICOM network communication (1)

Transferred from: http://www.cnblogs.com/assassinx/p/3649103.htmlLook at the standard more and more paste, the root cause: Dicom abstraction is very serious, is "expert" to get. No way.What is the service class is what SOP, I believe you see the DICOM standard head most do not know how to start. It's not the socket, it's hard. First you have to understand that God is called PDU, from the PDU, I can only say

Dicom network communication (1)

The more you look at the standard, the more obscure it is. The root cause is that dicom is very abstract, which is obtained by "experts. No way. What kind of service is and what kind of sop, I believe you don't know how to start with the dicom standard. Isn't it socket? How hard is this. First of all, you have to understand that the magic horse is called a pdu. Pdu is the pdu protocol data unit. You can un

DICOM Image Viewer for iPad

DICOM viewer Luo chaohui (http://blog.csdn.net/kesalin) CC license, reprinted please indicate the source It took several days to create a simple DICOM viewer. Instead of using the DCMTK library, the viewer transplanted a DICOM file parser (thanks toamarnath S and his greatpost .). This DICOMThe file parser is already open-source,Source codeHere or https://gi

Python reads an instance of the Dicom header file

This article mainly introduces the Python read the dicom header file instance, has a certain reference value, now share to everyone, the need for friends can refer to Open dicom image with Dicompyler software, header file: Of course, you can read it directly: ds = Dicom.read_file (' h:\data\data\\21662\\2.16.840.1.113662.2.0.105002416.1489146183.701\ct\\ct#0#21662# E7AB693D.DCM ') print ds>> (0008, 0008)

Dicom database creation problems

I searched a lot of materials on the Internet and roughly concluded that five tables are currently needed. 1. patient (patientID is the primary key) 2. check (studyinstanceUID is the primary key) 3. sequence (seriesinstanceUID is the primary key) 4. image (imageinstanceUID is the primary key) 5... I searched a lot of materials on the Internet and roughly concluded that five tables are currently needed. 1. patient (patientID is the primary key) 2. check (study instance UID is the primary key) 3.

Dicom image pixel value (grayscale value) converted to CT value

The Unit of CT value is Hounsfield, referred to as Hu, the range is-1024-3071. It is used to measure the absorption rate of X-rays in human tissues, and to set the water absorption rate at 0Hu.In the dicom image reading process, we will find that the pixel value of the image may not be this range, usually 0-4096, which is the pixel value we often see or grayscale value, which requires us to the image pixel value (gray value) into the CT value.First, y

DICOM dir File Format

file: dicomdir.rar the compressed file is a sample of two dicomdir files. dicomdir is a micro-database in a tree structure. The file structure of the CD is recorded. the dicomdir tree directory is a special directory structure specified in the DICOM standard, from the top layer to the bottom layer, the thumbnail is the scaled down image. Dicomdir and thumbnails can be used to conveniently and batch Import images to prevent incorrect image op

How to Use DCMTK to traverse and read all tags of DICOM files

Key function: dcmobject * dcmitem: nextincontainer (const dcmobject * OBJ), which is a virtual function in dcmobject and implemented by the dcmitem class. Because the dcmdataset class inherits from dcmitem, therefore, the dcmdataset object can use

text/image/application/Type Understanding Application Loader application JSON application manage

Recently in the Nginx module configuration, and then exposed to some type definition types For example: image/jpegimage/pngtext/plaintext/javascripttext/css;application/xmlapplication/x-javascript It is not clear why different files need different types of distinction, and then go to Baidu to find the following general information: Content-type: Defines how the user's browser or related device Displays the data that will be loaded, or how to hand

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