Non-root permissions install Python+htseq+numpy+easy_install__python

1. Direct non-root permissions install a Python

First, under the Software List folder

mkdir python-2.7

CD python-2.7

Download python-2.7.10 to current folder

CD python-2.7.10

[Plain] View plain copy./configure--prefix=/lustre/user/zhangjia/software/python-2.7
[Plain] View plain copy make install and then generate a directory bin under python-2.7 this file

modifying. bashrc files

Add to:

[Plain] View plain copy pythondir=/lustre/user/zhangjia/software/python-2.7/bin export path= $PYTHONDIR: $PATH execution. Bash Rc

Source and. is the same

The installation was successful and Python is now its own.

2. Install Easy_install

Download ez_setup.py

Then Python ez_setup.py build

Hint Https://pypi.python.org/packages/source/s/setuptools/setuptools-8.0.4.zip this setuptools not down to, do not know is not the reason of the network. Open this webpage directly, download good setuptools-8.0.4.zip not unpack to put under python-2.7 folder.

Re-execute the python ez_setup.py build

Ok!

Python ez_setup.py Install

Installed under your own python. There's easy_install.

However, try the next

Easy_install NumPy did not succeed, Easy_install put not move.

3. Install PIP

Download pip

Extract PIP Package

Installation: Python setuppy install

After installation, the PIP can be found under Python2.7/bin

4. Install NumPy [Plain] View plain copy pip install NumPy

5. Install Htseq [Plain] View plain copy pip install Htseq

Htseq-count and Htseq-qa under the Python-2.7/bin.